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Resource ValueSet/FHIR Server from package us.nlm.vsac#0.22.0 (156 ms)

Package us.nlm.vsac
Type ValueSet
Id Id
FHIR Version R4
Source http://fhir.org/packages/us.nlm.vsac/https://vsac.nlm.nih.gov/valueset/2.16.840.1.113762.1.4.1146.308/expansion
Url http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.308
Version 20230602
Status active
Date 2023-06-02T01:03:51-04:00
Name InvasivePneumococcalDiseaseTestsForStreptococcusPneumoniaeNucleicAcid
Title Invasive Pneumococcal Disease (Tests for Streptococcus pneumoniae Nucleic Acid)
Experimental False
Realm us
Authority hl7
Purpose (Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of Streptococcus pneumoniae nucleic acid),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: VSAC query: streptococcus pneumoniae probe/non-probe; LOINC search: 'Streptococcus pneumoniae nucleic acid -culture'),(Exclusion Criteria: none)

Resources that use this resource

No resources found


Resources that this resource uses

CodeSystem
http://loinc.org LOINC Code System
http://loinc.org LOINC codes used in this IG
http://loinc.org Logical Observation Identifiers, Names and Codes (LOINC)


Source

{
  "resourceType" : "ValueSet",
  "id" : "2.16.840.1.113762.1.4.1146.308",
  "meta" : {
    "versionId" : "40",
    "lastUpdated" : "2023-12-21T17:43:03.000-05:00",
    "profile" : [
      "http://hl7.org/fhir/StructureDefinition/shareablevalueset",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/computable-valueset-cqfm",
      "http://hl7.org/fhir/us/cqfmeasures/StructureDefinition/publishable-valueset-cqfm"
    ]
  },
  "extension" : [
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/valueset-author",
      "valueContactDetail" : {
        "name" : "CSTE Author"
      }
    },
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/valueset-keyWord",
      "valueString" : "G_Vaccine,Invasive_Pneumococcal_Disease,Trigger"
    },
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/resource-lastReviewDate",
      "valueDate" : "2024-06-05"
    },
    {
      "url" : "http://hl7.org/fhir/StructureDefinition/valueset-effectiveDate",
      "valueDate" : "2023-06-02"
    }
  ],
  "url" : "http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1146.308",
  "identifier" : [
    {
      "system" : "urn:ietf:rfc:3986",
      "value" : "urn:oid:2.16.840.1.113762.1.4.1146.308"
    }
  ],
  "version" : "20230602",
  "name" : "InvasivePneumococcalDiseaseTestsForStreptococcusPneumoniaeNucleicAcid",
  "title" : "Invasive Pneumococcal Disease (Tests for Streptococcus pneumoniae Nucleic Acid)",
  "status" : "active",
  "date" : "2023-06-02T01:03:51-04:00",
  "publisher" : "CSTE Steward",
  "jurisdiction" : [
    {
      "coding" : [
        {
          "system" : "urn:iso:std:iso:3166",
          "code" : "US"
        }
      ]
    }
  ],
  "purpose" : "(Clinical Focus: This set of values contains codes for laboratory test names associated with detecting the presence of Streptococcus pneumoniae nucleic acid),(Data Element Scope: Laboratory tests names that were ordered or observed.),(Inclusion Criteria: VSAC query: streptococcus pneumoniae probe/non-probe; \n\nLOINC search: 'Streptococcus pneumoniae nucleic acid -culture'),(Exclusion Criteria: none)",
  "compose" : {
    "include" : [
      {
        "system" : "http://loinc.org",
        "concept" : [
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            "code" : "49672-9",
            "display" : "Streptococcus pneumoniae DNA [Presence] in Specimen by NAA with probe detection"
          },
          {
            "code" : "5035-1",
            "display" : "Streptococcus pneumoniae rRNA [Presence] in Specimen by Probe"
          },
          {
            "code" : "51668-2",
            "display" : "Streptococcus pneumoniae DNA and Haemophilus influenza DNA and Pseudomonas aeruginosa DNA [Identifier] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code" : "53917-1",
            "display" : "Streptococcus pneumoniae DNA [Presence] in Blood by NAA with probe detection"
          },
          {
            "code" : "62493-2",
            "display" : "Streptococcus pneumoniae DNA and Haemophilus influenza DNA and Streptococcus agalactiae DNA [Identifier] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code" : "76572-7",
            "display" : "Streptococcus pneumoniae nanA gene [Presence] in Swab specimen by NAA with probe detection"
          },
          {
            "code" : "76587-5",
            "display" : "Streptococcus pneumoniae nanA gene [#/mass] in XXX.tissue by NAA with probe detection"
          },
          {
            "code" : "76600-6",
            "display" : "Streptococcus pneumoniae nanA gene [#/volume] in XXX.body fluid by NAA with probe detection"
          },
          {
            "code" : "82187-6",
            "display" : "Streptococcus pneumoniae DNA [Presence] in Cerebral spinal fluid by NAA with non-probe detection"
          },
          {
            "code" : "85496-8",
            "display" : "Streptococcus pneumoniae serotype [Identifier] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85688-0",
            "display" : "Streptococcus pneumoniae lytA gene [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85740-9",
            "display" : "Streptococcus pneumoniae Danish serotype 5 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85741-7",
            "display" : "Streptococcus pneumoniae Danish serotype 4 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85742-5",
            "display" : "Streptococcus pneumoniae Danish serotype 3 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85743-3",
            "display" : "Streptococcus pneumoniae Danish serotype 23F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85744-1",
            "display" : "Streptococcus pneumoniae Danish serotype 2 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85745-8",
            "display" : "Streptococcus pneumoniae Danish serotype 19F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85746-6",
            "display" : "Streptococcus pneumoniae Danish serotype 14 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85747-4",
            "display" : "Streptococcus pneumoniae Danish serotype 1 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85748-2",
            "display" : "Streptococcus pneumoniae Danish serotypes 7A+7F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85749-0",
            "display" : "Streptococcus pneumoniae Danish serotypes 22A+22F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85750-8",
            "display" : "Streptococcus pneumoniae Danish serotype 23A DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85751-6",
            "display" : "Streptococcus pneumoniae Danish serotype 16F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85752-4",
            "display" : "Streptococcus pneumoniae Danish serotypes 9A+9V DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85753-2",
            "display" : "Streptococcus pneumoniae Danish serotypes 6C+6D DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85754-0",
            "display" : "Streptococcus pneumoniae Danish serotypes 6A+6B+6C+6D DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85755-7",
            "display" : "Streptococcus pneumoniae Danish serotypes 33A+33F+37 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85756-5",
            "display" : "Streptococcus pneumoniae Danish serotypes 18A+18B+18C+18F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85757-3",
            "display" : "Streptococcus pneumoniae Danish serotypes 15A+15F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85758-1",
            "display" : "Streptococcus pneumoniae Danish serotypes 12A+12F+44+46 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85759-9",
            "display" : "Streptococcus pneumoniae Danish serotypes 11A+11D DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "85760-7",
            "display" : "Streptococcus pneumoniae Danish serotype 19A DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
          },
          {
            "code" : "86503-0",
            "display" : "Deprecated Streptococcus pneumoniae serotype DNA [Identifier] in Unspecified specimen by NAA with probe detection"
          },
          {
            "code" : "92125-4",
            "display" : "Streptococcus pneumoniae DNA [Presence] in Respiratory specimen by NAA with probe detection"
          },
          {
            "code" : "92771-5",
            "display" : "Streptococcus pneumoniae DNA [Presence] by NAA with probe detection in Positive blood culture"
          },
          {
            "code" : "92948-9",
            "display" : "Streptococcus pneumoniae DNA [NCncRange] in Sputum Qualitative by NAA with non-probe detection"
          },
          {
            "code" : "92949-7",
            "display" : "Streptococcus pneumoniae DNA [NCncRange] in Bronchoalveolar lavage Qualitative by NAA with non-probe detection"
          },
          {
            "code" : "94367-0",
            "display" : "Streptococcus pneumoniae DNA [Presence] in Lower respiratory specimen by NAA with probe detection"
          },
          {
            "code" : "96330-6",
            "display" : "Streptococcus pneumoniae DNA [NCncRange] in Lower respiratory specimen Qualitative by NAA with non-probe detection"
          },
          {
            "code" : "97637-3",
            "display" : "Streptococcus pneumoniae DNA [Presence] in Synovial fluid by NAA with non-probe detection"
          }
        ]
      }
    ]
  },
  "expansion" : {
    "identifier" : "urn:uuid:86a51616-6a24-4d36-989a-e390d6d40185",
    "timestamp" : "2025-05-11T04:26:30-04:00",
    "total" : 39,
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        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "49672-9",
        "display" : "Streptococcus pneumoniae DNA [Presence] in Specimen by NAA with probe detection"
      },
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        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "5035-1",
        "display" : "Streptococcus pneumoniae rRNA [Presence] in Specimen by Probe"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "51668-2",
        "display" : "Streptococcus pneumoniae DNA and Haemophilus influenza DNA and Pseudomonas aeruginosa DNA [Identifier] in Unspecified specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "53917-1",
        "display" : "Streptococcus pneumoniae DNA [Presence] in Blood by NAA with probe detection"
      },
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        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "62493-2",
        "display" : "Streptococcus pneumoniae DNA and Haemophilus influenza DNA and Streptococcus agalactiae DNA [Identifier] in Unspecified specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "76572-7",
        "display" : "Streptococcus pneumoniae nanA gene [Presence] in Swab specimen by NAA with probe detection"
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        "code" : "76600-6",
        "display" : "Streptococcus pneumoniae nanA gene [#/volume] in XXX.body fluid by NAA with probe detection"
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        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "82187-6",
        "display" : "Streptococcus pneumoniae DNA [Presence] in Cerebral spinal fluid by NAA with non-probe detection"
      },
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        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85496-8",
        "display" : "Streptococcus pneumoniae serotype [Identifier] in Specimen by NAA with probe detection"
      },
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        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85688-0",
        "display" : "Streptococcus pneumoniae lytA gene [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
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        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85740-9",
        "display" : "Streptococcus pneumoniae Danish serotype 5 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
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        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85741-7",
        "display" : "Streptococcus pneumoniae Danish serotype 4 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
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        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85742-5",
        "display" : "Streptococcus pneumoniae Danish serotype 3 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85743-3",
        "display" : "Streptococcus pneumoniae Danish serotype 23F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
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        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85744-1",
        "display" : "Streptococcus pneumoniae Danish serotype 2 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85745-8",
        "display" : "Streptococcus pneumoniae Danish serotype 19F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85746-6",
        "display" : "Streptococcus pneumoniae Danish serotype 14 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85747-4",
        "display" : "Streptococcus pneumoniae Danish serotype 1 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85748-2",
        "display" : "Streptococcus pneumoniae Danish serotypes 7A+7F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85749-0",
        "display" : "Streptococcus pneumoniae Danish serotypes 22A+22F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85750-8",
        "display" : "Streptococcus pneumoniae Danish serotype 23A DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85751-6",
        "display" : "Streptococcus pneumoniae Danish serotype 16F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85752-4",
        "display" : "Streptococcus pneumoniae Danish serotypes 9A+9V DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85753-2",
        "display" : "Streptococcus pneumoniae Danish serotypes 6C+6D DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85754-0",
        "display" : "Streptococcus pneumoniae Danish serotypes 6A+6B+6C+6D DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85755-7",
        "display" : "Streptococcus pneumoniae Danish serotypes 33A+33F+37 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85756-5",
        "display" : "Streptococcus pneumoniae Danish serotypes 18A+18B+18C+18F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85757-3",
        "display" : "Streptococcus pneumoniae Danish serotypes 15A+15F DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85758-1",
        "display" : "Streptococcus pneumoniae Danish serotypes 12A+12F+44+46 DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85759-9",
        "display" : "Streptococcus pneumoniae Danish serotypes 11A+11D DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "85760-7",
        "display" : "Streptococcus pneumoniae Danish serotype 19A DNA [Cycle Threshold #] in Specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "92125-4",
        "display" : "Streptococcus pneumoniae DNA [Presence] in Respiratory system specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "92771-5",
        "display" : "Streptococcus pneumoniae DNA [Presence] by NAA with probe detection in Positive blood culture"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "92948-9",
        "display" : "Streptococcus pneumoniae DNA [NCncRange] in Sputum by NAA with non-probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "92949-7",
        "display" : "Streptococcus pneumoniae DNA [NCncRange] in Bronchoalveolar lavage by NAA with non-probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "94367-0",
        "display" : "Streptococcus pneumoniae DNA [Presence] in Lower respiratory specimen by NAA with probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "96330-6",
        "display" : "Streptococcus pneumoniae DNA [NCncRange] in Lower respiratory specimen by NAA with non-probe detection"
      },
      {
        "system" : "http://loinc.org",
        "version" : "2.80",
        "code" : "97637-3",
        "display" : "Streptococcus pneumoniae DNA [Presence] in Synovial fluid by NAA with non-probe detection"
      }
    ]
  },
  "text" : {
  }
}

XIG built as of ??metadata-date??. Found ??metadata-resources?? resources in ??metadata-packages?? packages.